Analyze your data based on powerful principles
HiCognition allows data analysis of genomic datasets based on the genomic region set approach. Combined with efficient preprocessing and interactive data visualization, this enables rapid exploration.
Genomic
Region Sets
Genomic region sets are the central component of HiCognition. They allow answering complex questions within an integrated framework.
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Efficient
Preprocessing
HiCognition allows efficient aggregation of genomic features at region sets to facilitate rapid exploration.
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Interactive
Exploration
HiCognition's interactive visualization widgets allow quick data integration to uncover complex dependencies.
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Explore average behavior
using aggregation widgets
HiCognition allows visualizing the average behavior of genomic features at genomic regions using aggregation widgets. These widgets allow users to explore both 1D- and 2D-genomic features at genomic region sets.
Discover heterogeneity in your data sets
using embedding widgets
HiCognition features widgets that allow embedding of genomic regions based on genomic features. This way, the heterogeneity of genomic locations can be visualized and further explored by generating new subsets.
Discover associations
using the LOLA widget
HiCognition users can use a powerful widget that implements the LOLA algorithm to discover associations between genomic region sets.
About our project team
HiCognition is a software project co-initiated by Michael Mitter & Christoph Langer
Michael Mitter is a molecular biologist, who has transitioned to the field of data science is now focused on applying his data science knowledge to solve biological challenges.
About
Michael Mitter
Codeveloper
Christoph Langer has a dual background in scientific computing and molecular biology and is interested in bringing computer science, software development, and agile project management best practices into live sciences.
About
Christoph Langer
Codeveloper
Ulrich Aschl is a trained software engineer and IT enthusiast who has been interested in technology from very early on. After his studies in Software Engineering he has done a Master's in Biomedical Engineering.
About
Ulrich Aschl
Codeveloper
Get in Touch
Contact us on github if you have questions or suggestions about HiCognition.
Contribute
If you want to contribute to HiCognition, have a look at our contribution guidelines.